Protein ZmHB5
ZmHB5 is a protein in the Homeobox family.
Information
TF Name: ZmHB5
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB5
Uniprot ID: K4JRN7

Protein ZmHB5

ZmHB5 is a protein in the Homeobox family.

Overview of domains present in v5 transcripts
PF00046PF02183
Zm00001eb006700_T002
Zm00001eb006700_T001
Zm00001eb006700_T003

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d027991DAPseq no logo sequence fimo position
Zm00001d027991DAPseq no logo sequence fimo position
Zm00001d027991ChIPseq no logo sequence fimo position
Zm00001d027991PChIPseq no logo sequence fimo position

Interactions where ZmHB5 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB5 is the target  
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There are 147 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb006700_T002 from maize genome v5

Amino Acid Sequence
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MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00046
PF02183
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Nucleotide Sequence
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GGCATCGCGGCGCTGTCCAACCGGG...

GRMZM2G132367_T01 from maize genome v3


Related TFome: pUT3181

Amino Acid Sequence
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MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

Nucleotide Sequence
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ACTCGTATTGTTCAAAGGAAAACGG...

GRMZM2G132367_T02 from maize genome v3

Amino Acid Sequence
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MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

Nucleotide Sequence
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ATGGGCGCTTGCCTCAGTCGTTTGC...

Zm00001d027991_T001 from maize genome v4

Amino Acid Sequence
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MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

Nucleotide Sequence
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TTTGCCCCTTTGGTCCCTCTCCCTC...

Zm00001d027991_T002 from maize genome v4

Amino Acid Sequence
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RWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIRELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGA
CKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPFLDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACA
GYGFTEEWRRRRGGVLLRGSRLQPQLQLVPEWHPGLGVKRGF

Nucleotide Sequence
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CCGCTGGAAGACCAAGACGCTCGAG...

Zm00001d027991_T003 from maize genome v4

Amino Acid Sequence
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MATAARRGSSPRITPPASTSTGARVASRAGSEEGFLICTASVKKPMLRWHLYMHGTGV

Nucleotide Sequence
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GGCGCCGACGGGCTGCTCGTCTCCC...

Zm00001eb006700_T001 from maize genome v5

Amino Acid Sequence
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MKRQSKRPTASRESPETGEKQKLAFAEEEAPPARKVEPDDEAEMDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVR
ALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWKTKTLERDFAALRARHDALRADCDALRRDKDALAAEIR
ELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKDGSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPF
LDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYGFTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPS
GIQGWE

Nucleotide Sequence
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GGCATCGCGGCGCTGTCCAACCGGG...

Zm00001eb006700_T003 from maize genome v5

Amino Acid Sequence
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MDEDEDELGPGLGGGRAARSPCGLGEKKRRLALEQVRALERCFETDNKLDPDRKARIARDLALQPRQVAVWFQNRRARWK
TKTLERDFAALRARHDALRADCDALRRDKDALAAEIRELRQKLLPKPEATVKLEATTGNDTAEERRQATAGAPPAGACKD
GSSDSDSSVVFSDVEASPYSGGAAFEPPALAGLGAPFLDTSVAPTGCSSPPVFVETKWQQHGPTQYPFPFDSYKACAGYG
FTEEWLASSDLIGSDGGAAGFFSEDHASSLNFNWCPSGIQGWE

Nucleotide Sequence
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AGCTAACCGCACGCGCGAATTGCAG...

Zm00001eb006710_T001 from maize genome v5

Amino Acid Sequence
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MTEQEQSVNYLGGEGVLVAAERVAVGAEGVVARAQRREVALERLGLPAGAAVLEPDGDLARLQREVARDAGLAVRVQLVV
RLEAALQRAHLLQRQAPLLLPEPARRPRRAPAAQARAQLVLVLVHLGLVVGLHLPRRRGLFLRERQLLLLPCNSRVRLAT
GGFPKMKGGDPFFLQLCGSKLTKCKKWNAGRSNTDQMSKARIRTFLFTNYYTPFGILSRTSRTQYLFLGIRGWRWASWIA
SSSVIRASAALQGFGNGGDPNPN

Nucleotide Sequence
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CCCCTTCAGACGCTCTCGTCGCCGA...


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